Information for 13-CAACAGTAGT (Motif 20)

A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A G T A C A C G T C G T A G T A C A C G T C T A G A C G T A C G T A C T G
p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.924
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.8 +/- 23.1bp
Average Position of motif in Background67.1 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAACAGTAGT----
ATTTACAGTAGCAAAA
 A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CAACAGTAGT----
ATGTACAGTAGCAAAG
 A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAACAGTAGT-
-AACAGCTGTT
 A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T

Tcf21/MA0832.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAACAGTAGT---
NCAACAGCTGTTGC
 A C G T A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAACAGTAGT---
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAACAGTAGT
GAACAATGG-
 A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAACAGTAGT
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAACAGTAGT
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAACAGTAGT-
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

MSC/MA0665.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAACAGTAGT-
-AACAGCTGTT
 A G T C C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T