Information for 13-CCCCGAACCTCTC (Motif 17)

A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C T G A C T G A C G T A C G T A G T C A T C G A C T G A C T G A C T G
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 30.3bp
Average Position of motif in Background65.9 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCCGAACCTCTC---
-----AGCCACTCAAG
 A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

RREB1/MA0073.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCCGAACCTCTC-------
CCCCAAACCACCCCCCCCCA
 A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCCCGAACCTCTC--
-----AASCACTCAA
 A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCCCGAACCTCTC
AAGCCCCCCAAAAAT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CCCCGAACCTCTC---
------NSCACTYVAV
 A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CCCCGAACCTCTC---
------RSCACTYRAG
 A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCCCGAACCTCTC
ACCACATCCTGT-
 A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCCCGAACCTCTC-
NNGGCGACACCTCNNN
 A C G T A C G T A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CCCCGAACCTCTC------
----NNAATTCTCGNTNAN
 A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------CCCCGAACCTCTC
AGGAGACCCCCAATTTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A T G C T A C G C G T A C G T A A G T C A G T C A C G T A G T C A C G T A G T C
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G A C G T A C G T