Information for 7-CHVCATGCACAGT (Motif 10)

G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T
Reverse Opposite:
C G T A A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G A C G T C A G T A C T G
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.9 +/- 27.7bp
Average Position of motif in Background46.3 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CHVCATGCACAGT
--CCAGGAACAG-
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CHVCATGCACAGT--
-----TGCCCAGNHW
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CHVCATGCACAGT
GCGCATGCGCAG-
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CHVCATGCACAGT
-------CACAGN
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CHVCATGCACAGT
GCGCATGCGCAC-
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CHVCATGCACAGT
TCCAATCCACA--
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CHVCATGCACAGT--
--ATATGCAAATNNN
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CHVCATGCACAGT-----
--CGAAGCACACAAAATA
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CHVCATGCACAGT
----ATGCCCACC
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CHVCATGCACAGT--
---TATGCWAATBAV
 G T A C G T C A T C G A A G T C C G T A A C G T A C T G A G T C C G T A A G T C C G T A A C T G C G A T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G