Information for 21-CGGGCAAAAAGAG (Motif 35)

A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.7 +/- 24.6bp
Average Position of motif in Background80.9 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGGCAAAAAGAG
TACTGGAAAAAAAA-
 A C G T A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAAAAAGAG
TNNGGGCAG------
 A C G T A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGGGCAAAAAGAG-
--GCTAAAAATAGC
 A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGGCAAAAAGAG--
ATGCTAAAAATAGAA
 A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGGCAAAAAGAG-
--DCYAAAAATAGM
 A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGGCAAAAAGAG-
--KCCAAAAATAGC
 A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGGCAAAAAGAG
ARGAGGMCAAAATGW-
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGGGCAAAAAGAG
--GGAACAAAGR-
 A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAAAAAGAG
NGTGGGCAT------
 A C G T A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CGGGCAAAAAGAG
CAATTGCAAAAATAT
 A C G T A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C T G C G T A A C T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T