Information for 20-GAAMAGCCCAGAT (Motif 34)

T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T
Reverse Opposite:
G T C A C A G T A T G C C G A T A C T G C A T G C T A G G A T C C G A T A C G T C G A T G C A T A G T C
p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.650
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif332.6
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets53.6 +/- 25.4bp
Average Position of motif in Background51.0 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAAMAGCCCAGAT-
----TGCCCAGNHW
 T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAAMAGCCCAGAT
TGGAACAGMA-----
 A C G T A C G T T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAAMAGCCCAGAT
---CAGCC-----
 T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAAMAGCCCAGAT--
-----GCAGTGATTT
 T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAAMAGCCCAGAT-
GGGRAARRGRMCAGMTG
 A C G T A C G T A C G T T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAAMAGCCCAGAT-------
---AAGGCCAGATGGTCCGG
 T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GAAMAGCCCAGAT
CCAGGAACAG-------
 A C G T A C G T A C G T A C G T T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAAMAGCCCAGAT
GGAAATCCCC----
 A C G T T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAAMAGCCCAGAT--
----TGCTGTGATTT
 T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAAMAGCCCAGAT-
GGCAAAAGTCCAATAA
 A C G T A C G T T C A G C G T A G C T A T G A C G C T A C A T G G A T C G T A C T A G C C G T A T A C G G C T A C A G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T