Information for 18-YGCCTTGTCCTGC (Motif 31)

A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G A C T G G C T A G T A C C G T A C G T A C T A G A C T G G T A C C T A G
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.851
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 26.6bp
Average Position of motif in Background46.9 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-YGCCTTGTCCTGC
TGACCTTGACCT--
 A C G T A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-YGCCTTGTCCTGC
TGACCTTGACCT--
 A C G T A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:YGCCTTGTCCTGC
-----TGACCT--
 A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YGCCTTGTCCTGC
GGGGCCGAGGCCTG-
 A C G T A C G T A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YGCCTTGTCCTGC
-YCTTTGTTCC--
 A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:YGCCTTGTCCTGC----
--CTTTGTTATGCAAAT
 A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YGCCTTGTCCTGC
-CCATTGTTTT--
 A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:YGCCTTGTCCTGC
-----TGACCTYA
 A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:YGCCTTGTCCTGC-
----ATTTCCTGTN
 A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:YGCCTTGTCCTGC
----GTGACCTT-
 A G C T A C T G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T