Information for 5-CTAATCAGTCTTT (Motif 6)

A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
Reverse Opposite:
G C T A C G T A G T C A C T A G C G T A A G T C A C G T A C T G C T G A C G A T A C G T C G T A A C T G
p-value:1e-16
log p-value:-3.744e+01
Information Content per bp:1.841
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.3 +/- 33.8bp
Average Position of motif in Background51.9 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0031.1_Evx1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGTCTTT
NNNCACTAATTAGTNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T A C G T

PH0092.1_Lhx2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGTCTTT
NNNNNCTAATTAGTTTA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTAATCAGTCTTT
AGCGCTAATTAGCGATT
 A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0027.1_Emx2/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGTCTTT
NNCCACTAATTAGNNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGTCTTT
NTNTTCTTATCAGTNTN-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGTCTTT
NNNCGCTAATTAGNNGA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGTCTTT
CACCGCTAATTAGNNGN-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTAATCAGTCTTT
ANCGCTAATTGGTCTNN
 A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PH0094.1_Lhx4/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTAATCAGTCTTT
TAAACTAATTAGCTTTG
 A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G

PH0032.1_Evx2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTAATCAGTCTTT
CACCGCTAATTAGCGGT-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T C A C G T A A G C T G T A C C G T A A C T G A C G T A G T C A C G T A C G T C G A T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T A C G T