Information for 9-CCTAATCGTA (Motif 13)

G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A T G A C A T C G C G T A C G A T A C G T C G T A A C T G C A T G
p-value:1e-9
log p-value:-2.198e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 20.3bp
Average Position of motif in Background56.9 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCTAATCGTA
-CTAATCGNT
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

BARX1/MA0875.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCTAATCGTA
-NTAATTGN-
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCTAATCGTA
CCTAATCCGC
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCTAATCGTA
-YTAATCCY-
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCTAATCGTA
-TTAATCCG-
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTAATCGTA
GCTAATCC--
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTAATCGTA
GCTAATCCCC
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTAATCGTA
-TTAATCCT-
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTAATCGTA---
CCTTAATNGNTTTT
 A C G T G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

BSX/MA0876.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTAATCGTA
-NTAATTGG-
 G T A C A G T C A C G T C G T A C G T A A C G T A T G C A C T G A C G T C G T A
A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T