Information for 5-YCCCYCCCTTCTGDGC (Motif 9)

A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
Reverse Opposite:
A T C G T G A C G A C T G T A C T G C A C A T G T C G A C T G A A C T G C T A G T C A G C T A G A T C G T A C G C T A G C T G A
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.585
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.82%
Number of Background Sequences with motif1399.7
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets45.8 +/- 26.7bp
Average Position of motif in Background49.8 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:YCCCYCCCTTCTGDGC
---CCCCCTGCTGTG-
 A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YCCCYCCCTTCTGDGC
-GGCCYCCTGCTGDGH
 A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YCCCYCCCTTCTGDGC
CCCCCCCC--------
 A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:YCCCYCCCTTCTGDGC
-GACCCCCCGCTGCGC
 A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-YCCCYCCCTTCTGDGC---
GCCTCCTCCMTCWGACTGKS
 A C G T A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:YCCCYCCCTTCTGDGC
-GACCCCCCGCTGTGC
 A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----YCCCYCCCTTCTGDGC
TCCCCCCCCCCCCCC-----
 A C G T A C G T A C G T A C G T A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----YCCCYCCCTTCTGDGC
GGTCCCGCCCCCTTCTC---
 A C G T A C G T A C G T A C G T A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T

PB0100.1_Zfp740_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---YCCCYCCCTTCTGDGC
CCCCCCCCCCCACTTG---
 A C G T A C G T A C G T A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YCCCYCCCTTCTGDGC
-GACCCCCCGCTGTG-
 A G C T G A T C A T G C T A G C A G T C A G T C A G T C T G A C G A C T A G C T G T A C A C G T A C T G C T G A A C T G T A G C
A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T