Information for 6-GAGCGCCCTCTAG (Motif 8)

A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G
Reverse Opposite:
A G T C A C G T C G T A C T A G C T G A A C T G A C T G A C T G A G T C A C T G A G T C A C G T G T A C
p-value:1e-14
log p-value:-3.224e+01
Information Content per bp:1.921
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.8 +/- 29.7bp
Average Position of motif in Background33.3 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGCGCCCTCTAG----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAGCGCCCTCTAG
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAGCGCCCTCTAG
ANCGCGCGCCCTTNN-
 A C G T A C G T A C G T A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGCGCCCTCTAG------
TAGCGCCCCCTGGTGGCCA
 A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGCGCCCTCTAG------
ANAGTGCCACCTGGTGGCCA
 A C G T A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGCGCCCTCTAG
NTCGCGCGCCTTNNN-
 A C G T A C G T A C G T A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGCGCCCTCTAG--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAGCGCCCTCTAG
NCANGCGCGCGCGCCA-
 A C G T A C G T A C G T A C G T A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGCGCCCTCTAG
AGCGCGCC------
 A C G T A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAGCGCCCTCTAG-----
-NTCNTCCCCTATNNGNN
 A C T G G T C A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A