Information for 9-TGGCCGATAG (Motif 16)

A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G
Reverse Opposite:
G T A C A G C T T G C A A G C T G A T C C T A G A C T G A G T C A G T C G T C A
p-value:1e-9
log p-value:-2.183e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.2 +/- 5.5bp
Average Position of motif in Background81.6 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGCCGATAG
-GGCVGTTR-
 A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGCCGATAG
TTGGCA-----
 A C G T A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGGCCGATAG
TGGCAGTTGG
 A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGCCGATAG-
-AGCCAATCGG
 A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCGATAG
NTTGGCANN---
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCGATAG----
NNNACCGAGAGTNNN
 A C G T A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCGATAG
CTAGGCCT----
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCGATAG
TGATTGGCTANN--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGCCGATAG---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGCCGATAG
TAATGGCGGNC--
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C A T G C T G A A C G T C T G A A C T G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T