Information for 1-CACYAGRGGGCRCTVB (Motif 1)

A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
Reverse Opposite:
T G A C A T G C C T G A A T C G G A T C C A T G G T A C A G T C G T A C A G T C A T G C G A C T C T A G T A C G A C G T A C T G
p-value:1e-97
log p-value:-2.240e+02
Information Content per bp:1.606
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif11.91%
Number of Background Sequences with motif234.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets53.4 +/- 22.5bp
Average Position of motif in Background51.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--CACYAGRGGGCRCTVB--
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----CACYAGRGGGCRCTVB
TGGCCACCAGGGGGCGCTA-
 A C G T A C G T A C G T A C G T A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----CACYAGRGGGCRCTVB
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CACYAGRGGGCRCTVB
NCNCAGCGGGGGGTC----
 A C G T A C G T A C G T A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CACYAGRGGGCRCTVB-
NNNAAGGGGGCGGGNNN
 A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACYAGRGGGCRCTVB
CACAGCGGGGGGTC----
 A C G T A C G T A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CACYAGRGGGCRCTVB
NCGCAGCGGGGGGTC----
 A C G T A C G T A C G T A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACYAGRGGGCRCTVB
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACYAGRGGGCRCTVB
CACAGCAGGGGG------
 A C G T A C G T A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACYAGRGGGCRCTVB
-AACAGATGGC-----
 A G T C T G C A A T G C G A T C C T G A A T C G C T A G A C T G A C T G A C T G G T A C C T A G T A G C G A C T T A C G A C T G
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T