Information for 3-NSGCCCCGCCCCY (Motif 3)

G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C
Reverse Opposite:
T C A G C T A G T C A G A T C G A C T G A G T C A T C G C T A G A C T G T A C G A G T C A T G C C G A T
p-value:1e-13
log p-value:-3.140e+01
Information Content per bp:1.637
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif15.26%
Number of Background Sequences with motif1128.9
Percentage of Background Sequences with motif6.11%
Average Position of motif in Targets49.0 +/- 26.9bp
Average Position of motif in Background49.1 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NSGCCCCGCCCCY
-GGCCCCGCCCCC
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:NSGCCCCGCCCCY-
NAGCCCCGCCCCCN
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.92
Offset:2
Orientation:forward strand
Alignment:NSGCCCCGCCCCY----
--GCCCCGCCCCCTCCC
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.91
Offset:2
Orientation:forward strand
Alignment:NSGCCCCGCCCCY
--GCCCCGCCCCC
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-NSGCCCCGCCCCY--
TCGACCCCGCCCCTAT
 A C G T G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.90
Offset:2
Orientation:forward strand
Alignment:NSGCCCCGCCCCY
--GCCCCGCCCC-
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C
A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:NSGCCCCGCCCCY
--GCCMCRCCCH-
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C
A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.89
Offset:2
Orientation:reverse strand
Alignment:NSGCCCCGCCCCY
--GCCCCACCCA-
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C
A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.89
Offset:0
Orientation:forward strand
Alignment:NSGCCCCGCCCCY--
NRGCCCCRCCCHBNN
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.88
Offset:2
Orientation:reverse strand
Alignment:NSGCCCCGCCCCY-
--GCCMCGCCCMCY
 G C T A T A C G C T A G A T G C A G T C G A T C T A G C C T A G A G T C A T G C A G T C G A T C A G T C A C G T
A C G T A C G T T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C