Information for 10-AGCCTTTTGC (Motif 11)

C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C
Reverse Opposite:
A C T G T G A C G C T A T C G A T G C A T C G A C A T G A C T G T G A C G C A T
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.576
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif91.8
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets55.9 +/- 25.9bp
Average Position of motif in Background50.5 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTTTTGC--
CCACCTGTTGCAT
 A C G T C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGCCTTTTGC--
ANCCACCTGTTGCNC
 A C G T A C G T A C G T C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCCTTTTGC-
NGCCTNAGGCN
 C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCCTTTTGC-
CGCCTCAGGCA
 C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCCTTTTGC---
ATTGCCTCAGGCAAT
 A C G T A C G T C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCCTTTTGC-
AGCCTCAGGCA
 C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCTTTTGC
CAGCC------
 A C G T C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCCTTTTGC
CTAATCCTCTT--
 A C G T A C G T A C G T C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGCCTTTTGC----
TGACCTTTGCCCTA
 C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCCTTTTGC---
ATTGCCTGAGGCAAT
 A C G T A C G T C G T A A C T G T G A C G T A C A G C T A C G T A G C T C G A T A C T G T G A C A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T