Information for 3-TGCCACCAGGTGGCAG (Motif 4)

C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G
Reverse Opposite:
A T G C A G C T A T C G T A G C A G T C G T C A A G T C G A T C C G A T C T A G T A C G G C A T A C T G T C A G G T A C G T C A
p-value:1e-22
log p-value:-5.268e+01
Information Content per bp:1.653
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.05%
Number of Background Sequences with motif183.0
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets56.2 +/- 26.0bp
Average Position of motif in Background52.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TGCCACCAGGTGGCAG---
TGGCCACCAGGTGGCACTNT
 A C G T C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-TGCCACCAGGTGGCAG--
TGGCCACCAGGGGGCGCTA
 A C G T C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:TGCCACCAGGTGGCAG-----
-GCCASCAGGGGGCGCYVNNG
 C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGCCACCAGGTGGCAG
----AACAGATGGC--
 C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G
A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TGCCACCAGGTGGCAG-
-----CAAGATGGCGGC
 C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCCACCAGGTGGCAG
--VNAVCAGCTGGC--
 C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G
A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.60
Offset:7
Orientation:forward strand
Alignment:TGCCACCAGGTGGCAG
-------AGGTGTCA-
 C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGCCACCAGGTGGCAG
----NNCAGGTGNN--
 C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCCACCAGGTGGCAG
----AACAGATGGT--
 C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCCACCAGGTGGCAG
----AACAGGTGNT--
 C A G T C A T G A G T C G T A C C G T A A T G C G A T C C G T A C A T G T C A G C A G T C T A G A T C G A T G C T C G A T A C G
A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T