Information for 7-CAACTGCACATAA (Motif 9)

A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A
Reverse Opposite:
C G A T A G C T C G T A A C G T A T C G A C G T A C T G A T G C C G T A A C T G A C G T A C G T A C T G
p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 27.0bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAACTGCACATAA--
TACATGTGCACATAAAA
A C G T A C G T A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAACTGCACATAA----
-CGAAGCACACAAAATA
A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAACTGCACATAA--
CAGATGTGCACATACGT
A C G T A C G T A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAACTGCACATAA
CGACCAACTGCCGTG--
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAACTGCACATAA
SNGCACCTGCHS----
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAACTGCACATAA
CCAACTGCCA----
A C G T A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAACTGCACATAA
NNACAGCTGC------
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAACTGCACATAA
SSAATCCACANN-
A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAACTGCACATAA
YAACBGCC-----
A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAACTGCACATAA
CGACCAACTGCCATGC-
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A T C G A G T C C G T A A T G C C G T A A C G T C T G A C G T A
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T