Information for 20-GCAAGSAAKTGCC (Motif 34)

C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C
Reverse Opposite:
T C A G C T A G G T A C C G T A T G A C A C G T A C G T A T G C A G T C A G C T C G A T A C T G A G T C
p-value:1e-8
log p-value:-1.869e+01
Information Content per bp:1.743
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif64.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.7 +/- 20.4bp
Average Position of motif in Background43.4 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCAAGSAAKTGCC
-AAGGCAAGTGT-
 C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCAAGSAAKTGCC
TBGCACGCAA-----
 A C G T A C G T C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCAAGSAAKTGCC-
--TGGCACGTGCCA
 C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C A C G T
A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAAGSAAKTGCC
-AGAGGAAGTG--
 C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAAGSAAKTGCC-
--TGGCACGTGCCG
 C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C A C G T
A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAAGSAAKTGCC
---GGGAATTTCC
 C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PH0007.1_Barx1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCAAGSAAKTGCC----
-AAAGTAATTAGTGAAT
 C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAAGSAAKTGCC
AAAGRGGAAGTG--
 A C G T C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAAGSAAKTGCC
-ACAGGAAGTG--
 C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C
A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAAGSAAKTGCC
AVCAGGAAGT---
 C T A G G T A C C G T A C T G A A C T G A T C G C G T A G T C A A C T G G A C T A C T G A G T C A G T C
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T