Information for 22-CTGCAATWGAAAAATA (Motif 31)

A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A
Reverse Opposite:
A C G T G C T A A G C T A G C T A C G T C G A T C G A T G A T C C G A T C T G A C G A T C G A T C A T G T A G C C G T A A T C G
p-value:1e-8
log p-value:-2.003e+01
Information Content per bp:1.728
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.7 +/- 21.6bp
Average Position of motif in Background56.2 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAATWGAAAAATA-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAATWGAAAAATA-
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PH0063.1_Hoxb8/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTGCAATWGAAAAATA
ACCGGCAATTAATAAA--
 A C G T A C G T A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTGCAATWGAAAAATA---
----ATGCTAAAAATAGAA
 A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTGCAATWGAAAAATA
----NATGGAAAAN--
 A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTGCAATWGAAAAATA
----AATGGAAAAT--
 A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGCAATWGAAAAATA--
------DCYAAAAATAGM
 A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGCAATWGAAAAATA
TCTTTATATATAAATA
 A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGCAATWGAAAAATA
--GCAATAAAAA----
 A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A
A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CTGCAATWGAAAAATA--
------TCTAAAAATAGA
 A T G C C G A T A T C G G A T C G C T A C G T A G A C T C G T A C T A G C G T A C G T A C G T A C T G A C T G A C G A T G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A