Information for 9-ATAAGTTGCT (Motif 25)

T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T
Reverse Opposite:
C T G A A C T G G T A C G T C A T G C A T G A C A G C T G A C T T G C A A G C T
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.568
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif92.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets43.9 +/- 25.8bp
Average Position of motif in Background50.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ATAAGTTGCT-
---AGGTGTCA
 T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATAAGTTGCT----
--CTGTTGCTAGGS
 T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATAAGTTGCT------
-NCCGTTGCTANGNGN
 T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATAAGTTGCT----------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATAAGTTGCT------
-NNCGTTGCTATGGNN
 T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATAAGTTGCT
NNATAAGGNN--
 A C G T A C G T T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATAAGTTGCT--
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATAAGTTGCT---
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATAAGTTGCT
GTGGGGTGAT
 T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATAAGTTGCT
ATGGGGTGAT
 T C G A A C G T C T G A T C G A A C T G A C G T C A G T C A T G T G A C G A C T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T