Information for 18-AGTHDHCACCTCCCTT (Motif 24)

C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
Reverse Opposite:
G T C A C T G A A C T G A C T G A T C G C G T A A C T G A T C G A C G T C T A G C G A T G A C T C G T A C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.341e+01
Information Content per bp:1.784
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.7 +/- 22.4bp
Average Position of motif in Background50.7 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGTHDHCACCTCCCTT
-----NNACTTGCCTT
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTHDHCACCTCCCTT
NNGGCGACACCTCNNN-
 A C G T C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGTHDHCACCTCCCTT
---SNGCACCTGCHS-
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGTHDHCACCTCCCTT
----TACACCTGTC--
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGTHDHCACCTCCCTT
-----NCACCTGTN--
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGTHDHCACCTCCCTT
----NNCACCTGNN--
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGTHDHCACCTCCCTT
---TGACACCT-----
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGTHDHCACCTCCCTT
---NNACAGCTGC---
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGTHDHCACCTCCCTT
---NNGCAGCTGTC--
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGTHDHCACCTCCCTT
----AACACCTGCT--
 C G T A A C T G C G A T G A C T C G T A G C A T A G T C C G T A A T G C A G T C A C G T A T G C A G T C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T