Information for 10-CTTTTRMASWYCT (Motif 15)

A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T
Reverse Opposite:
C T G A A C T G C T G A C G A T T A G C A C G T A C T G A G C T C G T A G T C A C G T A G T C A A T C G
p-value:1e-11
log p-value:-2.683e+01
Information Content per bp:1.725
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif142.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets45.5 +/- 28.0bp
Average Position of motif in Background50.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTTTRMASWYCT
CCTTTTATAGNC--
 A C G T A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTTTTRMASWYCT
-ATTTGAATT---
 A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CTTTTRMASWYCT
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CTTTTRMASWYCT
NNNNNNCTTTTATAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTTTTRMASWYCT--
TACATGTGCACATAAAA
 A C G T A C G T A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTRMASWYCT-
TNNATTATGCATANNTT
 A C G T A C G T A C G T A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTRMASWYCT
ANATTTTTGCAANTN-
 A C G T A C G T A C G T A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTTTTRMASWYCT
--TTTGAAACCG-
 A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTTTTRMASWYCT--
CAGATGTGCACATACGT
 A C G T A C G T A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

POL005.1_DPE/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTTTTRMASWYCT-
-----GAAGATGTT
 A T G C C A G T C G A T A C G T A C G T C T G A T G A C C G T A A T C G C G T A A G C T G T A C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T