Information for 16-DGVTGATTTATCTAAC (Motif 22)

C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A A T C G C G T A G A C T C G T A C G T A C G T A A C G T A G T C C G T A A C T G A G T C G T A C
p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.813
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 27.4bp
Average Position of motif in Background45.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa9/MA0594.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:DGVTGATTTATCTAAC
---TGATTTATGGC--
 C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:DGVTGATTTATCTAAC
--NTGATTTATGGCC-
 C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:DGVTGATTTATCTAAC
---TGATTTATGGCC-
 C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:DGVTGATTTATCTAAC--
-------TTATGTAACAT
 C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:DGVTGATTTATCTAAC
---TGATTGATGA---
 C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:DGVTGATTTATCTAAC
CNGTGATTTN------
 C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:DGVTGATTTATCTAAC
------RTTATGYAAB
 C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:DGVTGATTTATCTAAC
---TGATTTATGGCC-
 C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-DGVTGATTTATCTAAC
NNANTGATTGATNTTN-
 A C G T C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--DGVTGATTTATCTAAC
TNNNATGATTTCNNCNN-
 A C G T A C G T C A G T A C T G T A G C A C G T T C A G C G T A A C G T A C G T A C G T C T G A A C G T A T G C C G A T G T C A C G T A A G T C
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T A C G T