Information for 24-GCAATCTTCAGAS (Motif 32)

A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
Reverse Opposite:
T A C G A C G T G T A C A C G T T C A G G T C A G T C A A C T G C G T A C G A T A C G T A C T G A G T C
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.805
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 30.8bp
Average Position of motif in Background54.4 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAATCTTCAGAS
-CAAGCTT-----
 A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCAATCTTCAGAS
CCTTGCAATTTTTNN--
 A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAATCTTCAGAS-
CTAATATTGCTAAA
 A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAATCTTCAGAS-
CTAATATTGCTAAA
 A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCAATCTTCAGAS
GCCGCCATCTTG----
 A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCAATCTTCAGAS
GCNGCCATCTTG----
 A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCAATCTTCAGAS
AAGGCGAAATCATCGCA-
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCAATCTTCAGAS
ATGCATWATGCATRW
 A C G T A C G T A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCAATCTTCAGAS
ATGCATAATTCA---
 A C G T A C G T A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GCAATCTTCAGAS
CCAATCAA-----
 A C T G G T A C C G T A C G T A C G A T A G T C A C G T A C G T A G T C C G T A A C T G C G T A A T C G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T