Information for 22-CCACAGAACACTGTGH (Motif 25)

A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T
Reverse Opposite:
C G A T A G T C G C T A G T A C C G T A A C T G C G A T A C T G C G A T A C G T A T G C A C G T A C T G A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.733
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.6 +/- 21.4bp
Average Position of motif in Background46.0 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCACAGAACACTGTGH--
---AAGAACATWHTGTTC
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCACAGAACACTGTGH--
---VAGRACAKWCTGTYC
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CCACAGAACACTGTGH
-----NAACAAT----
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCACAGAACACTGTGH
NTTNAGAACAATTA--
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCACAGAACACTGTGH
AACACCAAAACAAAGGA-
 A C G T A C G T A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCACAGAACACTGTGH-
TCACGGAACAATAGGTG
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCACAGAACACTGTGH
----VRAACAATGG--
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCACAGAACACTGTGH--
---VAGRACAKNCTGTBC
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCACAGAACACTGTGH
------AACAAT----
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCACAGAACACTGTGH-
-TTAAGAACAATAAATT
 A G T C G T A C T G C A G T A C C G T A T A C G C G T A C G T A G T A C C G T A G T A C A C G T A C T G C G A T A C T G G C A T A C G T
A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T