Information for 18-TCTTCYCCTGYTG (Motif 23)

A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A A T G C G T C A C T A G A C T G C T A G A C T G C G T A C G T A A C T G C T G A
p-value:1e-10
log p-value:-2.310e+01
Information Content per bp:1.914
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.6 +/- 26.0bp
Average Position of motif in Background39.9 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCTTCYCCTGYTG--
---CCCCCTGCTGTG
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCTTCYCCTGYTG-----
---TCNCCTGCTGNGNNN
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TCTTCYCCTGYTG-----
---TNTCCTGCTGTGNNG
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

SCRT2/MA0744.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCTTCYCCTGYTG---
---CCACCTGTTGCAT
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTTCYCCTGYTG---
-GGCCYCCTGCTGDGH
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCTTCYCCTGYTG-----
---NNTCCTGCTGTGNNN
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TCTTCYCCTGYTG---
------CCTGCTGAGH
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTTCYCCTGYTG
GCTTCC-------
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTTCYCCTGYTG---
-ANCCACCTGTTGCNC
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G A C G T A C G T A C G T
A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTTCYCCTGYTG
--TTCCTCT----
 A G C T A G T C A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A G C T A C G T A C T G
A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T A C G T A C G T