Information for 9-TTCTCCGTGAGGTCCC (Motif 23)

A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A G T C C G T A A G T C A C T G A C T G C G T A A C T G C G T A C G T A
p-value:1e-7
log p-value:-1.672e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.8 +/- 16.8bp
Average Position of motif in Background56.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTCTCCGTGAGGTCCC
----CGGTGACGTCAC
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTCTCCGTGAGGTCCC
----CAGTGTGGTCGC
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TTCTCCGTGAGGTCCC
NNAATTCTCGNTNAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TTCTCCGTGAGGTCCC---
---NCGATGACGTCATCGN
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TTCTCCGTGAGGTCCC
--CCCCCTTGGGCCCC
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.49
Offset:7
Orientation:forward strand
Alignment:TTCTCCGTGAGGTCCC
-------TRAGGTCA-
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TTCTCCGTGAGGTCCC
-------TGACGT---
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:8
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TTCTCCGTGAGGTCCC
-------TGACGTCA-
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TTCTCCGTGAGGTCCC
----NGRTGACGTCAY
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:forward strand
Alignment:----TTCTCCGTGAGGTCCC
AGTATTCTCGGTTGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A G T C
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C A C G T A C G T A C G T A C G T A C G T