Information for 1-GAAAGTGAAAGTR (Motif 1)

T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G
Reverse Opposite:
A G T C T C G A T A G C C G A T G A C T A G C T A G T C C T G A T A G C A C G T A G C T A G C T A G T C
p-value:1e-108
log p-value:-2.496e+02
Information Content per bp:1.675
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif13.24%
Number of Background Sequences with motif270.5
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets55.1 +/- 20.4bp
Average Position of motif in Background52.1 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGTR
GAAAGTGAAAGT-
 T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GAAAGTGAAAGTR
GAAACTGAAACT-
 T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGTR
GAAASYGAAASY-
 T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.94
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGTR
GRAASTGAAAST-
 T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GAAAGTGAAAGTR
GAAAMTGAAACT-
 T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.93
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAGTGAAAGTR---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTGAAAGTR-
AGAAAGTGAAAGTGA
 A C G T T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTGAAAGTR-
GGAAANTGAAACTNA
 A C G T T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTGAAAGTR----
GGAAAGCGAAACCAAAAC
 A C G T T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF7/MA0772.1/Jaspar

Match Rank:10
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--GAAAGTGAAAGTR
ACGAAAGCGAAAGT-
 A C G T A C G T T C A G C T G A C T G A T C G A A T C G G A C T C T A G C T G A C G T A C G T A A T C G A G C T T C A G
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T