Information for 3-AGCTGGGKGCGCAATT (Motif 2)

C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T C G A T A C T G A G T C A T C G A G T C G T A C G A T C A G T C A G T C G C T A A C T G A G T C A C G T
p-value:1e-15
log p-value:-3.474e+01
Information Content per bp:1.802
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 23.3bp
Average Position of motif in Background57.3 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGGGKGCGCAATT
DCHCAGCAGGRGGCC-----
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCTGGGKGCGCAATT
GTATTGGGTGGGTAATT
 A C G T C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

CEBPG/MA0838.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGCTGGGKGCGCAATT
-----ATTGCGCAAT-
 C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCTGGGKGCGCAATT
CACAGCAGGGGG-------
 A C G T A C G T A C G T C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGCTGGGKGCGCAATT
-----GTTGCGCAAT-
 C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGCTGGGKGCGCAATT
-----ATTGCGCAAT-
 C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AGCTGGGKGCGCAATT
-----ATTGCGCAAT-
 C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGCTGGGKGCGCAATT-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CEBPE/MA0837.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGCTGGGKGCGCAATT
-----ATTGCGCAAT-
 C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGCTGGGKGCGCAATT
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C A G T A C T G C T A G C A T G A C G T A C T G A T G C A C T G T A G C C G T A C G T A A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T