Information for 4-GATGGCCATCACD (Motif 5)

A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
Reverse Opposite:
G A T C A T C G C G A T A C T G G T C A C G A T A C T G C T A G A T G C G A T C C G T A C G A T A G T C
p-value:1e-12
log p-value:-2.778e+01
Information Content per bp:1.783
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 18.8bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GATGGCCATCACD
NAGATWNBNATCTNN
 A C G T A C G T A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GATGGCCATCACD
---GGCCATTAAC
 A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GATGGCCATCACD
GTCCGCCATTA--
 A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GATGGCCATCACD-
----GCCATCTGTT
 A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GATGGCCATCACD
NNANTGGTGGTCTTNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GATGGCCATCACD
-ATGACCTTGA--
 A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GATGGCCATCACD-
GARTGGTCATCGCCC
 A C G T A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GATGGCCATCACD
----GTCATN---
 A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GATGGCCATCACD
--TGACCTTGAV-
 A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GATGGCCATCACD
BNTGDCCTTG---
 A C T G G C T A A C G T C T A G A T C G A G T C A G T C C G T A C A G T A G T C G C T A A T G C C T A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T