Information for 1-ACACTTKTCGCTG (Motif 1)

G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G T A G C T A C G C G T A G T A C T C G A G T C A C A T G A G C T T A C G C A G T
p-value:1e-14
log p-value:-3.262e+01
Information Content per bp:1.725
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.86%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets35.6 +/- 18.6bp
Average Position of motif in Background62.8 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.58
Offset:9
Orientation:forward strand
Alignment:ACACTTKTCGCTG--
---------GCTGTG
 G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACACTTKTCGCTG
ANCCACCTGTTGCNC
 A C G T A C G T G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACACTTKTCGCTG
CCACCTGTTGCAT
 G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:ACACTTKTCGCTG
--------NGCTN
 G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Hes2/MA0616.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACACTTKTCGCTG
GCACGTGTCNNNN
 G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

CLOCK/MA0819.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACACTTKTCGCTG
AACACGTGTT----
 A C G T G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ACACTTKTCGCTG-
GTCATGCHTGRCTGS
 A C G T G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ACACTTKTCGCTG-
NGTCACGCTTGGCTGC
 A C G T A C G T G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:ACACTTKTCGCTG--
----AATTTGCTGAC
 G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-ACACTTKTCGCTG
ACCACTTGAA----
 A C G T G T C A A G T C C T G A G T A C A C G T A C G T C A T G A C G T A T G C A T C G A G T C C G A T A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T