Information for 7-TCAGCCGGTGACCTGG (Motif 22)

A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C T G A C G T A G T C C G T A A G T C G T A C C T A G C T A G A G T C A C G T A T C G C G T A
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 21.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG
--------TGACCT--
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG
-------GTGACCTT-
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG
TGACCCAGTGACCTAC
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG
--------TGACCTYA
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG--
--------TGACCTTGAT
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:7
Orientation:forward strand
Alignment:TCAGCCGGTGACCTGG-
-------NTGACCTTGA
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG----
----NNNNTGACCCGGCGCG
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG-
----CNNTTGACCTTTG
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG---
-----NGATGACGTGGCAN
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TCAGCCGGTGACCTGG----
---NNNNATGACCTTGANTN
 A C G T A T G C C G T A A C T G A G T C A G T C A C T G A C T G A C G T A C T G C G T A A G T C A G T C C G A T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A