Information for 5-AGGTTGGTTA (Motif 12)

C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A
Reverse Opposite:
G C A T G T C A G T C A A G T C A G T C C T G A T G C A T A G C G T A C G A C T
p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.663
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.79%
Number of Background Sequences with motif433.2
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets49.6 +/- 25.2bp
Average Position of motif in Background49.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGGTTGGTTA--
--ACTAGTTAAC
 C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A A C G T A C G T
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

POL007.1_BREd/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGGTTGGTTA
--GTTTGTT-
 C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A
A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGTTGGTTA-------
NNNTTAGTTAACTNANN
 C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGTTGGTTA-------
NTTTTAGTTAACNNAGN
 C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGTTGGTTA
--GGCVGTTR
 C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGTTGGTTA------
ANNNCTAGTTAACNGNN
 A C G T C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGGTTGGTTA-
---TTGTTTAC
 C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGGTTGGTTA-
---TTGTTTAC
 C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGTTGGTTA-----
GAAAACTAGTTAACATC
 A C G T A C G T C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

FOXD1/MA0031.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGTTGGTTA-
---ATGTTTAC
 C T G A C A T G A T C G A C G T A G C T T C A G T C A G C A G T C A G T C G T A A C G T
A C G T A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C