Information for 4-GCTTGAGTHATCAGCH (Motif 4)

C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
Reverse Opposite:
C G T A A T C G A G T C C G A T T A C G C G T A C G A T C G T A C G T A A T G C A C G T A T G C C G T A C G T A A C T G A G T C
p-value:1e-15
log p-value:-3.507e+01
Information Content per bp:1.813
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 23.4bp
Average Position of motif in Background39.9 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:1
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTGAGTHATCAGCH
TTTMCGCTTSABTGAACACN-
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A A C G T

JDP2/MA0655.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTTGAGTHATCAGCH
--ATGAGTCAT-----
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTTGAGTHATCAGCH
-GATGAGTCATN----
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTTGAGTHATCAGCH
---TGAGTCA------
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTTGAGTHATCAGCH
--ATGASTCATY----
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C G T A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTTGAGTHATCAGCH
--NTGAGTCATCN---
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCTTGAGTHATCAGCH
---TGACTCAGCA---
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A A C G T A C G T A C G T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCTTGAGTHATCAGCH
-GATGAGTCATCC---
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C A C G T A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTTGAGTHATCAGCH
--ATGAGTCATCN---
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C G T A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTTGAGTHATCAGCH
NNATGASTCATH----
 C T A G A G T C A C G T C G A T A T C G C G T A A T C G A C G T G A C T C G T A A C G T A T G C C G T A A C T G A T G C G A C T
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T A C G T A C G T A C G T