Information for 16-CCVTGCTGTGAACTBA (Motif 30)

A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
Reverse Opposite:
C G A T T C G A C G T A A C T G C G A T A C G T G T A C C G T A A T G C C G T A A C T G G T A C C G T A A C T G A C T G A T C G
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.756
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 24.0bp
Average Position of motif in Background73.1 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCVTGCTGTGAACTBA
NNTCCTGCTGTGNNN---
 A C G T A C G T A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCVTGCTGTGAACTBA
CCCCCTGCTGTG------
 A C G T A C G T A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCVTGCTGTGAACTBA
-CCTGCTGAGH-----
 A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCVTGCTGTGAACTBA
TNTCCTGCTGTGNNG---
 A C G T A C G T A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCVTGCTGTGAACTBA
TCNCCTGCTGNGNNN---
 A C G T A C G T A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCVTGCTGTGAACTBA
GGCCYCCTGCTGDGH-----
 A C G T A C G T A C G T A C G T A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCVTGCTGTGAACTBA
----GCTGTG------
 A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCVTGCTGTGAACTBA
----CCTTTGATGT--
 A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCVTGCTGTGAACTBA
--TNCCTTTGATCTTN
 A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCVTGCTGTGAACTBA
GACCCCCCGCTGTG------
 A C G T A C G T A C G T A C G T A T G C A G T C T A G C A C G T A C T G A G T C A C G T A T C G C G A T C A T G T G C A C G T A G T A C C G A T A C G T C G T A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T