Information for 5-CCTMATGCAGATGAAA (Motif 11)

A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A
Reverse Opposite:
A C G T A C G T C G A T T G A C G C T A A G C T T A G C C G A T A C T G A G T C C G T A C A G T A C G T C G T A A C T G C T A G
p-value:1e-11
log p-value:-2.639e+01
Information Content per bp:1.681
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 15.9bp
Average Position of motif in Background45.1 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTMATGCAGATGAAA
--ATATGCAAATNNN-
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCTMATGCAGATGAAA
---WATGCAAATGAG-
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A
A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTMATGCAGATGAAA
TTGTATGCAAATTAGA
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTMATGCAGATGAAA
TTGTATGCAAATTAGA
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTMATGCAGATGAAA
TTGTATGCAAATTAGA
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CCTMATGCAGATGAAA----
------AAAGATCAAAGGAA
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTMATGCAGATGAAA-
--ATTTGCATAACAAAG
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A A C G T
A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCTMATGCAGATGAAA
-----ANCAGCTG---
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.57
Offset:8
Orientation:forward strand
Alignment:CCTMATGCAGATGAAA----
--------ACATCAAAGGNA
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTMATGCAGATGAAA
--TTATGCAAAT----
 A G T C T A G C C G A T G T C A G C T A A C G T C T A G A G T C C G T A A T C G C T G A C A G T A C T G C G T A C G T A T C G A
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T