Information for 13-GGCTGTATAT (Motif 31)

A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T C G T A A G T C C G T A A T C G A G T C A G T C
p-value:1e-6
log p-value:-1.451e+01
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 28.1bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCTGTATAT---
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGCTGTATAT----
--NTGTTTAYATWW
 A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCTGTATAT------
ATGGGATATATCCGCCT
 A C G T A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCTGTATAT---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCTGTATAT---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCTGTATAT--
--ATGMATATDC
 A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGCTGTATAT
---TGTTTAC
 A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCTGTATAT---
-CBTGTTTAYAWW
 A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGCTGTATAT
--TTGTTTAC
 A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T
A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCTGTATAT--
---TGTTTATTT
 A C T G A C T G A T G C A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T