Information for 11-AGCAGAGTGC (Motif 27)

C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C
Reverse Opposite:
A T C G T A G C G T C A G T A C C G A T T G A C C G A T A C T G A G T C G A C T
p-value:1e-7
log p-value:-1.821e+01
Information Content per bp:1.842
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif176.4
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets50.9 +/- 23.8bp
Average Position of motif in Background50.7 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCAGAGTGC
AACAGATGGC
 C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGAGTGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGCAGAGTGC-
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCAGAGTGC
CACAGCAGGGGG-
 A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGCAGAGTGC-
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCAGAGTGC
AACAKATGGY
 C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCAGAGTGC
AACAGATGGT
 C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGAGTGC-
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGCAGAGTGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCAGAGTGC--
--TTRAGTGSYK
 C T G A A C T G A G T C C G T A A C T G C G T A C A T G A C G T A T C G A T G C A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T