Information for 9-CAGCAGGCAG (Motif 25)

A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G
Reverse Opposite:
A G T C A C G T A C T G A T G C A T G C A C G T T C A G T G A C C G A T C T A G
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.819
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif562.5
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets50.7 +/- 25.8bp
Average Position of motif in Background49.5 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGGCAG
CACAGCAGGGGG
 A C G T A C G T A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGCAG
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGCAG
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGCAG--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGCAG
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGCAG
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGCAGGCAG-
-ANCAGGAAGT
 A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G A C G T
A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGCAGGCAG-
-AVCAGGAAGT
 A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G A C G T
A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGCAGGCAG--
--ACAGGAAGTG
 A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G A C G T A C G T
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAGCAGGCAG
NAACAGCTGG---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C G T C A T A C G A T C G G T A C G T C A T C A G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T