p-value: | 1e-8 |
log p-value: | -1.976e+01 |
Information Content per bp: | 1.733 |
Number of Target Sequences with motif | 18.0 |
Percentage of Target Sequences with motif | 2.60% |
Number of Background Sequences with motif | 205.7 |
Percentage of Background Sequences with motif | 0.43% |
Average Position of motif in Targets | 40.9 +/- 24.1bp |
Average Position of motif in Background | 48.3 +/- 28.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0159.1_Rfx4_2/Jaspar
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTGGYGACG-- TACCCTAGTTACCGA |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTGGYGACG---- CTACTTGGATACGGAAT |
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PB0158.1_Rfx3_2/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CCTGGYGACG------ ACTGACCCTTGGTTACCACAAAG |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 4 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTGGYGACG- SCCTAGCAACAG |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTGGYGACG GTTGCCATGGCAAC- |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTGGYGACG-- TACCATAGCAACGGT |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTGGYGACG-- CCGCATAGCAACGGA |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CCTGGYGACG TTGCCATGGCAACN |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CCTGGYGACG------ TGTGACCCTTAGCAACCGATTAA |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTGGYGACG TGTTKCCTAGCAACM |
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