Information for 9-SATTGTCCACGMY (Motif 16)

A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
Reverse Opposite:
T C G A A C G T A G T C C T A G A C G T A C T G A C T G C G T A A G T C C G T A C G T A C G A T A T C G
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.876
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 12.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--SATTGTCCACGMY
CTCATTGTC------
 A C G T A C G T A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--SATTGTCCACGMY
NCCATTGTTY-----
 A C G T A C G T A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----SATTGTCCACGMY
NNNCCATTGTGTNAN--
 A C G T A C G T A C G T A C G T A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------SATTGTCCACGMY
TGTTCCCATTGTGTACT--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--SATTGTCCACGMY
NCCATTGTTC-----
 A C G T A C G T A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-SATTGTCCACGMY
CCATTGTTTT----
 A C G T A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:SATTGTCCACGMY
-ATTTTCCATT--
 A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:SATTGTCCACGMY
----ATCCAC---
 A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:SATTGTCCACGMY
--TTTTCCA----
 A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-SATTGTCCACGMY
CCWTTGTYYB----
 A C G T A T G C C G T A A C G T A C G T A C T G A C G T A G T C A G T C G T C A A G T C A C T G T G A C A G C T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T