Information for 8-RTKTGACYSTCCT (Motif 14)

C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A T G C C T G A A C T G A C G T A G T C C G T A G T A C C G T A A G C T
p-value:1e-9
log p-value:-2.241e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.7 +/- 23.8bp
Average Position of motif in Background56.3 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---RTKTGACYSTCCT
GTCATGTGACC-----
 A C G T A C G T A C G T C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---RTKTGACYSTCCT
RTCATGTGAC------
 A C G T A C G T A C G T C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:RTKTGACYSTCCT
--GTGACCTT---
 C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---RTKTGACYSTCCT
GCCACGTGACC-----
 A C G T A C G T A C G T C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RTKTGACYSTCCT
--TTGACTTTT--
 C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RTKTGACYSTCCT
---TGACCT----
 C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:RTKTGACYSTCCT
---TGACCYCT--
 C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:RTKTGACYSTCCT
---TGACCTTGAT
 C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RTKTGACYSTCCT
--NTGACCTTGA-
 C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RTKTGACYSTCCT
NCGTGACN-----
 C T G A A C G T A C T G A C G T A C T G C G T A A G T C G A C T A T C G A C G T A G T C A G T C A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T