Information for 8-GCCTGAGATTAGA (Motif 11)

C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
Reverse Opposite:
A G C T A G T C A G C T C G T A C G T A C G A T A G T C A C G T A G T C C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.920e+00
Information Content per bp:1.930
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 27.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCCTGAGATTAGA
----RGGATTAR-
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCCTGAGATTAGA
--CNGTGATTTN-
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCTGAGATTAGA
TGCTGTGATTT--
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCTGAGATTAGA
---GNGGATTAGN
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCCTGAGATTAGA
-----GGATTAGC
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCTGAGATTAGA
---NNGGATTAGN
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCTGAGATTAGA
--NNGAGATAAGA
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCTGAGATTAGA
----GGGATTANN
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCCTGAGATTAGA
----GGGATTAA-
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCCTGAGATTAGA
-----AGATAAGA
 C T A G A G T C A G T C A C G T A C T G G T C A A C T G C G T A A C G T A C G T C T G A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A