Information for 8-TGTATGGTAA (Motif 10)

A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A
Reverse Opposite:
C G A T A G C T C T G A A T G C G T A C G T C A A C G T C G T A A G T C C T G A
p-value:1e-7
log p-value:-1.734e+01
Information Content per bp:1.779
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif103.9
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets62.6 +/- 23.9bp
Average Position of motif in Background49.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGTATGGTAA--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGTATGGTAA
CTGTCTGG---
 A C G T A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGTATGGTAA-
CCATTGTATGCAAAT
 A C G T A C G T A C G T A C G T A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TGTATGGTAA-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGTATGGTAA----
---CAGGTAAGTAT
 A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGTATGGTAA
VBSYGTCTGG---
 A C G T A C G T A C G T A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGTATGGTAA-
-GGAGGGGGAA
 A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A A C G T
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGTATGGTAA-
-GTGGGGTGAT
 A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGTATGGTAA--
--NATGGAAAAN
 A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A A C G T A C G T
A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TGTATGGTAA
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G A T G T C A A C G T A C T G T A C G A G C T C T G A C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T