Information for 12-GTGGGCTCTGCGC (Motif 11)

A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C C G T A A C T G C G T A A C T G A G T C A G T C A T G C C T G A A T G C
p-value:1e-10
log p-value:-2.423e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.5 +/- 23.5bp
Average Position of motif in Background58.2 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTGGGCTCTGCGC---
--NNGCNCTGCGCGGC
 A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGGGCTCTGCGC----
-TGGACTTTGNNCTNTG
 A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGGGCTCTGCGC---
-TGGACTTTGNNCTCN
 A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGGGCTCTGCGC--
-TGACCTTTGCCCTA
 A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTGGGCTCTGCGC
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCTCTGCGC--
ATTGGACTTTGACCCC
 A C G T A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTGGGCTCTGCGC---
-TGACCTTTGCCCTAN
 A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGGGCTCTGCGC--
-TGACCTTTGCCCCA
 A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GTGGGCTCTGCGC---
----GCTCCGCCCMCY
 A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGGGCTCTGCGC
CTGACCTTTG---
 A T C G A G C T A T C G A C T G C T A G A G T C A C G T A G T C A C G T A C T G A G T C A C T G A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T