Information for 8-GCGTGAGGTC (Motif 8)

C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A C G T A G T C C G T A A G T C A C T G G T A C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.946
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.8 +/- 27.9bp
Average Position of motif in Background23.4 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GCGTGAGGTC-
---TRAGGTCA
 C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCGTGAGGTC-
---TGACGTCA
 C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCGTGAGGTC--
CGGTGACGTCAC
 C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGGTC
TGCGTG-----
 A C G T C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCGTGAGGTC-
---AGRGGTCA
 C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCGTGAGGTC----
--RTGACGTCAYCN
 C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCGTGAGGTC--
NRRTGACGTCAT
 C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCGTGAGGTC----
--ATGACGTCATCN
 C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCGTGAGGTC----
--ATGACGTCATCN
 C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGTGAGGTC------
NTNNNGGGGTCANGNNN
 A C G T C A T G A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A