Information for 19-AGAGTAAGGAAAG (Motif 27)

C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G C T A G T C A G T C A C G T G A C T C G T A A G T C A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.966e+01
Information Content per bp:1.950
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.1 +/- 25.9bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGAGTAAGGAAAG-
--AGAAACGAAAGT
 C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGAGTAAGGAAAG---
-----AAGGCAAGTGT
 C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0033.1_Irf3_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAGTAAGGAAAG--
-GAGAACCGAAACTG
 C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G A C G T A C G T
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGAGTAAGGAAAG-
----NNTGGAAANN
 C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGAGTAAGGAAAG-
----AATGGAAAAT
 C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGAGTAAGGAAAG
CAAAAGTAAACAAAG
 A C G T A C G T C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGAGTAAGGAAAG
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGAGTAAGGAAAG
----AGAGGAA--
 C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G
A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGAGTAAGGAAAG
---NACAGGAAAT
 C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGAGTAAGGAAAG---
-----CAGGTAAGTAT
 C G T A A C T G C G T A A C T G A C G T C T G A C G T A A C T G A C T G C T G A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T