Information for 5-CTGWGATAAKTCA (Motif 2)

A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A
Reverse Opposite:
A C G T A C T G C G T A G T C A A C G T A C G T C G T A A C G T T G A C C G A T A G T C C G T A A T C G
p-value:1e-18
log p-value:-4.367e+01
Information Content per bp:1.799
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.7 +/- 20.2bp
Average Position of motif in Background46.0 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF::JUN/MA0462.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTGWGATAAKTCA
--GAAATGACTCA
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A
A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

Hoxa9/MA0594.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTGWGATAAKTCA
--GCCATAAATCA
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A
A C G T A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTGWGATAAKTCA
-GGCCATAAATCA
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGWGATAAKTCA-
-GGCCATAAATCAC
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

JUND/MA0491.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CTGWGATAAKTCA--
----NATGAGTCACN
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTGWGATAAKTCA
-GGCCATAAATCA
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A
A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CTGWGATAAKTCA-
-----AAAAGTCAA
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTGWGATAAKTCA--
---NNATGASTCATH
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGWGATAAKTCA--
----NATGAGTCANN
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGWGATAAKTCA-
----GATGAGTCAT
 A T G C G A C T A C T G C G T A A C T G C G T A A C G T G T C A C G T A A C G T C G A T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T