Information for 18-GMTGTWTSYCAGG (Motif 19)

A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T C G C T G A A T C G C G T A C G T A C G T A A G T C C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 27.5bp
Average Position of motif in Background25.7 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GMTGTWTSYCAGG
---HTTTCCCASG
 A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GMTGTWTSYCAGG-
--TGAGTGACAGSC
 A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GMTGTWTSYCAGG
-NTGATTGACAGN
 A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GMTGTWTSYCAGG
TGGCAGNCTGCCAG-
 A C G T A C G T A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GMTGTWTSYCAGG
-BTGABTGACAGS
 A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GMTGTWTSYCAGG-
-CTGTCTGTCACCT
 A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GMTGTWTSYCAGG-
TGACANARRCCAGRC
 A C G T A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GMTGTWTSYCAGG
-CTGTTTAC----
 A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G
A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GMTGTWTSYCAGG
--TGTTTAC----
 A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G
A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GMTGTWTSYCAGG-----
--GGATTGACAGGTCNTT
 A C T G G T A C A C G T A C T G A C G T C G A T A C G T A T G C G A C T A T G C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T