Information for 5-GGGGCACGTA (Motif 18)

A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C T G A C G T C A T G A G T C A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.7 +/- 14.0bp
Average Position of motif in Background47.8 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGGGCACGTA
--BGCACGTA
 A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGGGCACGTA---
---GCACGTACCC
 A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGGGCACGTA-
---GCACGTAY
 A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGGGCACGTA-
---GCACGTNC
 A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGGCACGTA--
RGGGCACTAACY
 A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGGCACGTA--
--GGCACGTGTC
 A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

Hes2/MA0616.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGGGCACGTA-
TAACGACACGTGC
 A C G T A C G T A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

GMEB2/MA0862.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGGGCACGTA-
---TTACGTAA
 A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A

Gmeb1/MA0615.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGGCACGTA------
GAGTGTACGTAAGATGG
 A C G T A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGGCACGTA------
GAGTGTACGTAAGATGG
 A C G T A C T G A C T G A C T G A C T G G A T C G T C A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G