Information for 17-WTCTAAYTCT (Motif 18)

G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T
Reverse Opposite:
C T G A C T A G T G C A C T G A C A G T A C G T G T C A A T C G C T G A C G T A
p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.691
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif316.1
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets52.0 +/- 24.3bp
Average Position of motif in Background50.3 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:WTCTAAYTCT-
---TAATCCCN
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PAX4/MA0068.2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:WTCTAAYTCT
--CTAATTAG
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T
A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:WTCTAAYTCT
--YTAATCCY
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

VSX1/MA0725.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:WTCTAAYTCT
--CTAATTAT
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T
A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T

VSX2/MA0726.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:WTCTAAYTCT
--CTAATTAG
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T
A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:WTCTAAYTCT--
--NTAATKGTTT
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T A C G T A C G T
A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

Dlx2/MA0885.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:WTCTAAYTCT
--NTAATTGN
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T
A C G T A C G T C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WTCTAAYTCT-
-NNTAATTANN
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T A C G T
A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:WTCTAAYTCT-------
--NNAATTCTCGNTNAN
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WTCTAAYTCT-
-GCTAATCCCC
 G C A T A G C T A T G C C A G T G T C A G T C A G A C T A C G T A G T C A G C T A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C